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alpine-aports

Re: [alpine-aports] [PATCH] testing/mumps: new aport

From: Carlo Landmeter <clandmeter_at_gmail.com>
Date: Mon, 10 Dec 2018 13:59:26 +0100

Hi,

I was going over some old patches on our list (sorry for a huge delay) and
came across some of yours.
It looks like many of your patches have incorrect white-space handling (we
used tabs) and lots of commented lines.

Also there are multiple incorrect license usages. Please use an identifiers
from https://spdx.org/licenses/

Thanks!

-carlo

On Tue, 21 Nov 2017 at 07:16, Jose Maria Garcia <josemaria.alkala_at_gmail.com>
wrote:

> http://mumps.enseeiht.fr/index.php?page=home
> MUMPS: MUltifrontal Massively Parallel sparse direct Solver
> ---
> testing/mumps/APKBUILD | 69 ++++++++++++++++++++
> testing/mumps/Makefile.inc | 158
> +++++++++++++++++++++++++++++++++++++++++++++
> 2 files changed, 227 insertions(+)
> create mode 100644 testing/mumps/APKBUILD
> create mode 100644 testing/mumps/Makefile.inc
>
> diff --git a/testing/mumps/APKBUILD b/testing/mumps/APKBUILD
> new file mode 100644
> index 0000000000..a1ea166c31
> --- /dev/null
> +++ b/testing/mumps/APKBUILD
> _at__at_ -0,0 +1,69 @@
> +# Contributor: Jose Maria Garcia <josemaria.alkala_at_gmail.com>
> +# Maintainer: Jose Maria Garcia <josemaria.alkala_at_gmail.com>
> +pkgname=mumps
> +pkgver=5.1.1
> +pkgrel=0
> +pkgdesc="MUMPS: MUltifrontal Massively Parallel sparse direct Solver"
> +url="http://mumps.enseeiht.fr/index.php?page=home"
> +arch="all"
> +license="CeCILL-C"
> +depends="metis lapack scotch scotch lapack"
> +makedepends="python2 py2-numpy lapack-dev gfortran metis-dev scotch-dev"
> +install=""
> +subpackages="$pkgname-dev $pkgname-examples"
> +
> +source="http://mumps.enseeiht.fr/MUMPS_${pkgver}.tar.gz"
> +builddir="$srcdir/MUMPS_${pkgver}"
> +
> +build() {
> + cd "${builddir}"
> + cp ../../Makefile.inc "${builddir}/Makefile.inc"
> + #sed s/OPTF = -O/OPTF = -DALLOW_NON_INIT ${CFLAGS} -O
> -fPIC/g
> + make clean
> + make -j1 all FC=gfortran FL=gfortran
> +}
> +
> +package() {
> + # https://aur.archlinux.org/cgit/aur.git/tree/PKGBUILD?h=mumps
> + cd "${builddir}/lib/"
> + echo "Creating package....$pkgname"
> + install -m 755 -d "${pkgdir}/usr/lib/"
> + # Convert static libraries into shareables
> + for _FILE in `ls *.a | sed "s|\.a||"`; do
> + echo " $_FILE"
> + ld -Bshareable -o ${_FILE}.so.${pkgver} -x -soname
> ${_FILE}.so --whole-archive ${_FILE}.a
> + install -m 644 -D ${_FILE}.a ${pkgdir}/usr/lib/${_FILE}.a
> + install -m 755 ${_FILE}.so.${pkgver} ${pkgdir}/usr/lib
> + ln -sf ${_FILE}.so.${pkgver}
> ${pkgdir}/usr/lib/${_FILE}.so.${pkgver:0:1}
> + done
> + echo "$builddir....... DONE"
> +}
> +
> +dev() {
> + pkgdesc="$pkgname - Headers"
> + subpkgdir=${pkgdir}-dev
> + # Installing headers
> + echo "Creating package....$pkgname-dev"
> + cd "${builddir}/include/"
> + echo "${subpkgdir}"
> + install -m 755 -d "${subpkgdir}/usr/include"
> + install -D -m644 *.h "${subpkgdir}/usr/include"
> + echo "Package......DONE"
> +}
> +
> +
> +examples() {
> + pkgdesc="$pkgname - Examples"
> + subpkgdir=${pkgdir}-examples
> + echo "Creating package....$pkgname-examples"
> + install -m 755 -d "${subpkgdir}/usr/share/${pkgname}/examples"
> +
> + cd "${builddir}/examples"
> + # Install examples
> + install -m 644 * "${subpkgdir}/usr/share/${pkgname}/examples"
> + for _FILE in ssimpletest dsimpletest csimpletest zsimpletest
> c_example; do
> + chmod 0755
> "${subpkgdir}/usr/share/${pkgname}/examples/${_FILE}"
> + done
> + echo "Package......DONE"
> +}
> +sha512sums="145dd61c9164bc50d07c2baf48345a2aca200332c4e359ea8b5b64fbb2027a6556f622a5620585b4852f785ba8e210267585c53634564f712828add2939901a9
> MUMPS_5.1.1.tar.gz"
> diff --git a/testing/mumps/Makefile.inc b/testing/mumps/Makefile.inc
> new file mode 100644
> index 0000000000..4afea6720a
> --- /dev/null
> +++ b/testing/mumps/Makefile.inc
> _at__at_ -0,0 +1,158 @@
> +#
> +# This file is part of MUMPS 5.1.1, released
> +# on Mon Mar 20 14:34:33 UTC 2017
> +#
>
> +################################################################################
> +#
> +# Makefile.inc.generic.SEQ
> +#
> +# Generic Makefile.inc for sequential (MPI free, Scalapack free)
> version
> +#
> +#
> +# This defines some parameters dependent on your platform; you should
> +# look for the approriate file in the directory ./Make.inc/ and copy it
> +# into a file called Makefile.inc. For example, from the MUMPS root
> +# directory, use
> +# "cp Make.inc/Makefile.inc.generic.SEQ ./Makefile.inc"
> +# (see the main README file for details)
> +#
> +# If you do not find any suitable Makefile in Makefile.inc, use this
> file:
> +# "cp Make.inc/Makefile.inc.generic ./Makefile.inc" and modify it
> according
> +# to the comments given below. If you manage to build MUMPS on a new
> platform,
> +# and think that this could be useful to others, you may want to send us
> +# the corresponding Makefile.inc file.
> +#
>
> +################################################################################
> +
> +
> +########################################################################
> +#Begin orderings
> +#
> +# NOTE that PORD is distributed within MUMPS by default. It is
> recommended to
> +# install other orderings. For that, you need to obtain the corresponding
> package
> +# and modify the variables below accordingly.
> +# For example, to have Metis available within MUMPS:
> +# 1/ download Metis and compile it
> +# 2/ uncomment (suppress # in first column) lines
> +# starting with LMETISDIR, LMETIS
> +# 3/ add -Dmetis in line ORDERINGSF
> +# ORDERINGSF = -Dpord -Dmetis
> +# 4/ Compile and install MUMPS
> +# make clean; make (to clean up previous installation)
> +#
> +# Metis/ParMetis and SCOTCH/PT-SCOTCH (ver 6.0 and later)
> orderings are recommended.
> +#
> +
> +#SCOTCHDIR = ${HOME}/scotch_6.0
> +#ISCOTCH = -I$(SCOTCHDIR)/include
> +#
> +# You have to choose one among the following two lines depending on
> +# the type of analysis you want to perform. If you want to perform only
> +# sequential analysis choose the first (remember to add -Dscotch in the
> ORDERINGSF
> +# variable below); for both parallel and sequential analysis choose the
> second
> +# line (remember to add -Dptscotch in the ORDERINGSF variable below)
> +
> +#LSCOTCH = -L$(SCOTCHDIR)/lib -lesmumps -lscotch -lscotcherr
> +#LSCOTCH = -L$(SCOTCHDIR)/lib -lptesmumps -lptscotch -lptscotcherr
> +
> +
> +LPORDDIR = $(topdir)/PORD/lib/
> +IPORD = -I$(topdir)/PORD/include/
> +LPORD = -L$(LPORDDIR) -lpord
> +
> +#LMETISDIR = /opt/metis-5.1.0/build/Linux-x86_64/libmetis
> +#IMETIS = /opt/metis-5.1.0/include
> +
> +# You have to choose one among the following two lines depending on
> +# the type of analysis you want to perform. If you want to perform only
> +# sequential analysis choose the first (remember to add -Dmetis in the
> ORDERINGSF
> +# variable below); for both parallel and sequential analysis choose the
> second
> +# line (remember to add -Dparmetis in the ORDERINGSF variable below)
> +
> +#LMETIS = -L$(LMETISDIR) -lmetis
> +#LMETIS = -L$(LMETISDIR) -lparmetis -lmetis
> +
> +# The following variables will be used in the compilation process.
> +# Please note that -Dptscotch and -Dparmetis imply -Dscotch and -Dmetis
> respectively.
> +# If you want to use Metis 4.X or an older version, you should use
> -Dmetis4 instead of -Dmetis
> +# or in addition with -Dparmetis (if you are using parmetis 3.X or older).
> +#ORDERINGSF = -Dscotch -Dmetis -Dpord -Dptscotch -Dparmetis
> +ORDERINGSF = -Dpord
> +ORDERINGSC = $(ORDERINGSF)
> +
> +LORDERINGS = $(LMETIS) $(LPORD) $(LSCOTCH)
> +IORDERINGSF = $(ISCOTCH)
> +IORDERINGSC = $(IMETIS) $(IPORD) $(ISCOTCH)
> +
> +#End orderings
> +########################################################################
> +
> +########################################################################
> +# DEFINE HERE SOME COMMON COMMANDS, THE COMPILER NAMES, ETC...
> +
> +# PLAT : use it to add a default suffix to the generated libraries
> +PLAT =
> +# Library extension, + C and Fortran "-o" option
> +# may be different under Windows
> +LIBEXT = .a
> +OUTC = -o
> +OUTF = -o
> +# RM : remove files
> +RM = /bin/rm -f
> +# CC : C compiler
> +CC = cc
> +# FC : Fortran 90 compiler
> +FC = f90
> +# FL : Fortran linker
> +FL = f90
> +# AR : Archive object in a library
> +# keep a space at the end if options have to be separated from lib
> name
> +AR = ar vr
> +# RANLIB : generate index of an archive file
> +# (optionnal use "RANLIB = echo" in case of problem)
> +RANLIB = ranlib
> +#RANLIB = echo
> +
> +# DEFINE HERE YOUR LAPACK LIBRARY
> +
> +LAPACK = -llapack
> +# The next two lines should not be modified. They concern
> +# the sequential library provided by MUMPS, to use instead
> +# of ScaLAPACK and MPI.
> +INCSEQ = -I$(topdir)/libseq
> +LIBSEQ = $(LAPACK) -L$(topdir)/libseq -lmpiseq
> +
> +# DEFINE HERE YOUR BLAS LIBRARY
> +
> +LIBBLAS = -lblas
> +
> +# DEFINE HERE YOUR PTHREAD LIBRARY
> +LIBOTHERS = -lpthread
> +
> +# FORTRAN/C COMPATIBILITY:
> +# Use:
> +# -DAdd_ if your Fortran compiler adds an underscore at the end
> +# of symbols,
> +# -DAdd__ if your Fortran compiler adds 2 underscores,
> +#
> +# -DUPPER if your Fortran compiler uses uppercase symbols
> +#
> +# leave empty if your Fortran compiler does not change the symbols.
> +#
> +
> +CDEFS = -DAdd_
> +
> +#COMPILER OPTIONS
> +#OPTF = -O
> +#OPTC = -O -I.
> +#OPTL = -O
> +OPTF = -DALLOW_NON_INIT ${CFLAGS} -O -fPIC
> +OPTL = ${CFLAGS} -fPIC
> +OPTC = ${CFLAGS} -fPIC
> +
> +
> +#Sequential:
> +
> +INCS = $(INCSEQ)
> +LIBS = $(LIBSEQ)
> +LIBSEQNEEDED = libseqneeded
> --
> 2.15.0
>
>
>
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Received on Mon Dec 10 2018 - 13:59:26 UTC